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Pedigree Tracking & Lineage Management

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Overview

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Automatic Lineage Compilation

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Seamless Pedigree Building

• Automatic Generation: Pedigrees build automatically from breeding pair records
• Linked Animals: Connect existing animals in the system to establish parent-child relationships
• Historical Integration: Import existing lineage data via mapped spreadsheet uploads
• Cross-Vivarium Lineage: Pedigrees span multiple vivariums with appropriate permissions

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Data Migration & Import

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Foundation Animal Management

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Lineage Starting Points

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Incomplete Lineage Handling

• Gap Marking: Clear visual indicators for unknown parents or missing generations
• Partial Pedigrees: Display available lineage information while acknowledging gaps
• Progressive Completion: Ability to fill in lineage gaps as information becomes available
• Transparency: Always show what is known vs. unknown in lineage chains

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Multi-Level Verification System

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Verification Levels

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Verification Process

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Visual Pedigree System

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Multiple Visualization Formats

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Interactive Digital Formats

• Traditional Pedigree Tree: Classic family tree layout with expandable branches
• Horizontal Timeline: Generational progression with time-based layout
• Network Graph: Interactive relationship mapping for complex lineages
• Compact View: Condensed format for mobile devices and quick reference

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Print & Export Formats

• Professional Certificates: High-quality PDF certificates for sales and documentation
• Exposition Displays: Large format prints suitable for trade shows and exhibitions
• Mobile-Optimized: Responsive design for smartphone and tablet viewing
• Custom Branding: Personalized certificates with breeder branding (premium tiers)

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Chart Depth & Navigation

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Interactive Features

• Animal Detail Access: Click any animal in the pedigree to view complete profile
• Visual Indicators: Color coding and icons for gender, species, and genetic traits
• Trait Filtering: Display only animals carrying specific genetic traits
• Expand/Collapse: Show or hide specific lineage branches
• Quick Scanning: Visual design optimized for rapid genetic pattern recognition

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Cross-Vivarium Integration

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Transparent Lineage Access

• Public Animals: Full pedigree access for any reptidex user
• Private Animals: Pedigree access limited to vivarium members
• Cross-Vivarium Breeding: Pedigrees span multiple vivariums when animals are bred across organizations
• Historical Access: Previous owners maintain access to archived animal records and pedigrees

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Collaborative Breeding Benefits

• Partnership Documentation: Clear records of cross-vivarium breeding projects
• Shared Verification: Collaborative verification of lineage across organizations
• Transparent Transactions: Complete lineage history transfers with animal ownership
• Trust Building: Verified lineages build confidence in breeding partnerships

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Genetic Analysis & Breeding Intelligence

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Coefficient of Inbreeding (COI) Analysis

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Breeding Prediction System

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Launch Features

• Fatal Pairing Alerts: Identify potentially lethal genetic combinations
• Basic Morph Prediction: Calculate probable offspring genetics for simple inheritance patterns
• COI Warnings: Alert breeders to high inbreeding coefficients before breeding

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Future AI-Powered Features

• Optimal Pairing Suggestions: Machine learning recommendations for breeding pairs
• Complex Genetic Modeling: Multi-gene trait predictions and interactions
• Population Genetics: Breeding program optimization for genetic diversity
• Outcome Probability: Detailed statistical analysis of breeding outcomes

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Professional Documentation

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Pedigree Certificates

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Certificate Information

• Animal Identification: Name, ID, species, morph, and key characteristics
• Complete Lineage: Multi-generation pedigree with verification levels
• Genetic Analysis: COI calculations and trait inheritance information
• Verification Status: Clear indication of lineage verification level
• Transfer History: Ownership chain and transfer documentation
• QR Code Integration: Digital verification and online pedigree access

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Animal Transfer & Ownership

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Pedigree Inheritance

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Privacy & Selective Disclosure

• Configurable Privacy: Option to hide specific lineage details while maintaining genetic relationships
• Selective Information: Choose what lineage information to share publicly
• Commercial Flexibility: Balance transparency with competitive business needs
• Buyer Assurance: Ensure buyers receive complete lineage information upon purchase

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Technical Implementation

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Database Architecture

-- Core pedigree structure
CREATE TABLE pedigrees (
    id UUID PRIMARY KEY DEFAULT gen_random_uuid(),
    animal_id UUID REFERENCES animals(id),
    sire_id UUID REFERENCES animals(id),
    dam_id UUID REFERENCES animals(id),
    verification_level VARCHAR(20) DEFAULT 'self_reported',
    verified_by UUID REFERENCES users(id),
    verification_date TIMESTAMP,
    coi_calculation DECIMAL(5,4),
    generation_depth INTEGER DEFAULT 0
);

-- Verification tracking
CREATE TABLE pedigree_verifications (
    id UUID PRIMARY KEY DEFAULT gen_random_uuid(),
    pedigree_id UUID REFERENCES pedigrees(id),
    verifier_id UUID REFERENCES users(id),
    verification_type VARCHAR(20),
    verification_date TIMESTAMP,
    supporting_documents JSONB,
    notes TEXT
);

-- Genetic analysis cache
CREATE TABLE genetic_analysis (
    id UUID PRIMARY KEY DEFAULT gen_random_uuid(),
    animal_id UUID REFERENCES animals(id),
    analysis_type VARCHAR(50),
    calculation_result JSONB,
    calculation_date TIMESTAMP,
    generation_depth INTEGER
);

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Performance Optimization

• Cached Calculations: Pre-calculated COI and genetic analysis for fast display
• Progressive Loading: Load pedigree data as needed for deep lineages
• Visualization Caching: Cache-generated pedigree charts for quick access
• Search Indexing: Optimized searching across lineage relationships

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Competitive Advantages

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Beyond Basic Pedigree Display

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Industry-Leading Features

• Gold Standard Program: Recognition system for comprehensive lineage tracking
• Cross-Vivarium Integration: Seamless pedigrees across multiple breeding organizations
• Studbook Quality: Professional-grade lineage management rivaling traditional animal registries
• Future-Proof Platform: AI and genetic testing integration ready for advancing technology

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Future Enhancements

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Phase 2: Advanced Genetics

• Complex Trait Modeling: Multi-gene inheritance patterns and epistatic interactions
• Population Genetics Tools: Breeding program optimization for genetic diversity
• Genomic Integration: Direct integration with advancing reptile genomics research

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Phase 3: AI-Powered Insights

• Machine Learning Predictions: Advanced breeding outcome modeling
• Pattern Recognition: Automatic detection of genetic patterns and anomalies
• Optimization Algorithms: Breeding program optimization for specific goals

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Phase 4: Industry Integration

• Registry Partnerships: Integration with official reptile registries and organizations
• Research Collaboration: Data sharing with reptile genetics research institutions
• Global Standards: Contribution to industry-wide pedigree and verification standards

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Getting Started

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Building Your First Pedigrees

1. Import Existing Data: Upload spreadsheet data with lineage information
2. Link Animals: Connect existing animals to establish parent-child relationships
3. Verify Information: Work toward higher verification levels for credibility
4. Generate Certificates: Create professional pedigree certificates for sales
5. Analyze Genetics: Use COI analysis and breeding predictions for program optimization

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Best Practices

• Start with Foundation Animals: Clearly designate wild-caught and unknown lineage animals
• Seek Verification: Work toward expert verification for valuable breeding stock
• Document Everything: Upload supporting documentation for verification purposes
• Use Genetic Testing: Leverage available genetic testing for ultimate verification
• Plan for Transparency: Balance privacy needs with buyer transparency expectations